SubtiBank SubtiBank
ycnE [2018-06-05 16:54:36]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ycnE [2018-06-05 16:54:36]

unknown
locus
BSU03870
pI
4.87
mw
10.81 kDa
protein length
95 aa Sequence Blast
gene length
285 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.5|Phosphorylation on a Ser residue]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    439,282 → 439,569

    The protein

    Protein family

  • lsrG family (according to Swiss-Prot)

    • Modification

  • phosphorylation on Ser-24 [Pubmed|17218307]

    • Structure

  • [PDB|1X7V] (from Pseudomonas aeruginosa, 38% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|C8B3C93479DC1EF6DAD6FCBEEBAD57817BBAFDDA|ycnE]-[gene|BA6C61C488659D5F1B5237BA817A8A5AC6D0E988|ycnD]
    description
    [Pubmed|17407181]

    regulation

  • induced by chromanon [Pubmed|17407181]
    • view in new tab

    Biological materials

    Mutant

  • BKE03870 (Δ[gene|C8B3C93479DC1EF6DAD6FCBEEBAD57817BBAFDDA|ycnE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTAAATCTCCTCCGTCG, downstream forward: _UP4_AGCGAGTAAAGGAAGGGTGT
  • BKK03870 (Δ[gene|C8B3C93479DC1EF6DAD6FCBEEBAD57817BBAFDDA|ycnE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTAAATCTCCTCCGTCG, downstream forward: _UP4_AGCGAGTAAAGGAAGGGTGT

    • References

  • 17407181,17218307